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[eno] Prune input revisions for refs removed from the synthesizer  - #673

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Ruinan Liu (ruinan-liu) wants to merge 2 commits into
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users/ruinanliu/fix-remove-input-from-synthesizer
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Ruinan Liu (ruinan-liu) wants to merge 2 commits into
mainfrom
users/ruinanliu/fix-remove-input-from-synthesizer

Updating code

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