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Preflight cbendercheck dev - #13

Merged

adamfreedman merged 3 commits into

mainfrom

preflight_cbendercheck_dev

Aug 30, 2026

Merged

Preflight cbendercheck dev#13
adamfreedman merged 3 commits into
mainfrom
preflight_cbendercheck_dev

Commits on Aug 24, 2026
- Add preflight cell-count gate to skip low-cell samples before the run
  
  adamfreedman
  and
  claude
  committed
  ff8ff06
- Add CellBender raw-matrix preflight (integrity error, droplet-sufficiency warning)
  
  adamfreedman
  and
  claude
  committed
  23fac55
- Add adaptive CellBender re-run based on the report's learning-curve assessment
  
  adamfreedman
  and
  claude
  committed
  276f4b6