Issues

• FYI: PAL2NAL Python port

  datasnakes/OrthoEvolution#224 · Filter by author mkuhn opened on Sep 4, 2026
  1

• Implement validation of configs and models.

  Priority: Medium 🔥🔥💺 Status: Available 💺Type: Maintenance 🔧
  datasnakes/OrthoEvolution#222 · Filter by author sdhutchins opened on Jul 14, 2026
  

• Transfer Manager, Cookie, and Tools into separate packages

  Priority: High 🔥🔥🔥Type: Enhancement ❤️
  datasnakes/OrthoEvolution#163 · Filter by author sdhutchins opened on Jun 26, 2020
  1

  

• Update Qstat for better use with JSON output

  datasnakes/OrthoEvolution#160 · Filter by author grabear opened on Feb 14, 2020
  1

• Qstat parsing will error on jobs that use characters that need to be escaped.

  datasnakes/OrthoEvolution#159 · Filter by author grabear opened on Feb 14, 2020
  1

• Consider moving the Manager/config directory to a higher level parent.

  Priority: Low 🔥Type: Discussion 💬Type: Enhancement ❤️
  datasnakes/OrthoEvolution#150 · Filter by author grabear opened on Jun 12, 2019
  

• Create an Icon or Image for the package.

  Beginner Friendly 😏🎃 Hacktoberfest 🎃🆘 Status: Help Wanted 🆘
  datasnakes/OrthoEvolution#133 · Filter by author grabear opened on Jan 18, 2018
  10

• Re-address the current ways that the various Orthologs modules handle the data/databases.

  Priority: Medium 🔥🔥Type: Enhancement ❤️
  datasnakes/OrthoEvolution#106 · Filter by author grabear opened on Oct 18, 2017 · Stable release v0.1
  1

  

• Add better functionality to the Tier system used by the Accession file.

  Priority: Low 🔥Type: Enhancement ❤️Type: Maintenance 🔧
  datasnakes/OrthoEvolution#105 · Filter by author grabear opened on Oct 17, 2017
  

• Create repository for external apps - Linux Admin Experience

  Contributor Friendly 👯Priority: Low 🔥Type: Enhancement ❤️💤 Status: On Hold 💤
  datasnakes/OrthoEvolution#89 · Filter by author sdhutchins opened on Oct 3, 2017
  6

  

• Command Line Interface

  Contributor Friendly 👯Priority: Low 🔥Type: Discussion 💬Type: Enhancement ❤️
  datasnakes/OrthoEvolution#80 · Filter by author grabear opened on Sep 27, 2017
  6

  

• Alignment Class

  Priority: High 🔥🔥🔥Type: Feature 🔑💤 Status: On Hold 💤
  datasnakes/OrthoEvolution#37 · Filter by author grabear opened on Aug 18, 2017 · Stable release v0.1
  4

  

• Module Testing

  🚧 Status: In Progress 🚧Priority: High 🔥🔥🔥🆘 Status: Help Wanted 🆘
  datasnakes/OrthoEvolution#25 · Filter by author sdhutchins opened on Jun 3, 2017 · Test All Modules
  3

  

• Works Cited

  Priority: Low 🔥Type: Documentation 📄
  datasnakes/OrthoEvolution#21 · Filter by author grabear opened on May 26, 2017
  4