All pull requests

Pull requests

• Datahub update: adding all public studies (1)

  #2385·Rima-Waleed opened Nov 2, 2026Collaborator·

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• Datahub study issues fix (3)

  #2383·Rima-Waleed opened Oct 27, 2026Collaborator·

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  1

• crc_hta11_htan_2021: rename ASC/SSC cell-type entities to match Chen et al. 2021

  #2382·inodb opened Oct 25, 2026Member·

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• Add Cell Explorer study-level resource links for 4 studies

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  #2381·inodb opened Oct 23, 2026Member·

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• Datahub study issues fix (2)

  #2379·Rima-Waleed opened Oct 15, 2026Collaborator·

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  1

• TCGA study ID normalization

  #2378·Rima-Waleed opened Oct 15, 2026Collaborator·

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• Document NEPC RNA expression investigation

  #2377·jiteshkhatri11 opened Oct 15, 2026·

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• coad_tcga_gdc: add Strand AI predicted proteomics resource data

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  #2376·inodb opened Oct 14, 2026Member·

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• Validate HTTP availability of study resource URLs

  #2374·OBagnell opened Oct 13, 2026·3 of 5 tasks·

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  1

• Add license field to CC-BY-NC-ND-4.0 studies

  #2372·inodb opened Oct 7, 2026Member·

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• Public Release Studies (1)

  #2371·Rima-Waleed opened Oct 7, 2026Collaborator·

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  2

• NCBI Build Annotation Issue Fix

  #2353·sbabyanusha opened Aug 25, 2026Collaborator·1 task done·

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• Remove group fields from meta files

  #2352·sbabyanusha opened Aug 17, 2026Collaborator·

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• Gene Panel Addition

  #2351·Rima-Waleed opened Aug 12, 2026Collaborator·

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• Datahub Studies Validation Fixes- 1

  #2346·sbabyanusha opened Jul 27, 2026Collaborator·1 task·

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• msk_spectrum_tme_2022: CD45 sort-fraction caveat + sort-fraction track

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  #2342·inodb opened Jul 1, 2026Member·

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• init

  #2341·sbabyanusha opened Jun 22, 2026Collaborator·15 tasks·

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• Datahub update: adding all public studies

  #2337·Rima-Waleed opened Jun 8, 2026Collaborator·

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• June Public Release

  #2336·Rima-Waleed opened Jun 8, 2026Collaborator·

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• update resource tab names - use long format

  #2329·rmadupuri opened Jun 1, 2026Collaborator·

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• First embedding file design

  #2328·i-am-leslie opened Jun 1, 2026·15 tasks·

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• April/May Public Studies

  #2288·Rima-Waleed opened Apr 9, 2026Collaborator·

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• 2019 CCLE CNA Data Fix

  #2283·Rima-Waleed opened Apr 6, 2026Collaborator·

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  1

• Re-annotate um_tcga_gdc with vibe-vep

  do not mergepreview
  #2273·inodb opened Mar 12, 2026Member·

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• Fix broken CT scan mapping for TCGA-IB-A6UG

  #2261·SudhanshuBisht07 opened Jan 26, 2026·

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  1