Skip to content
View ShixiangWang's full-sized avatar
🀄
Open Source Better Science
🀄
Open Source Better Science
899 followers · 580 following

Achievements

Achievement: Pull Sharkx4Achievement: Pair Extraordinairex3Achievement: Galaxy BrainAchievement: Starstruckx2Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull Sharkx4Achievement: Pair Extraordinairex3Achievement: Galaxy BrainAchievement: Starstruckx2Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Highlights

  • Pro

Organizations

@ropensci @conda-forge @openbiox @OncoHarmony-Network @Traitome @oxo-flow-community

Block or report ShixiangWang

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Content in all repositories owned by your account will be closed.
Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
ShixiangWang/README.md

Dr. Shixiang Wang | Associate Professor at CSU

Leader of Laboratory of In Silico Oncology and Medicine, and

co-leadership of OncoHarmony Network with Prof. Jian-Guo Zhou.

About

🔬 Research Focus: Bioinformatics · Cancer Genomics · Multi-omics Analysis
🛠️ Development: Developer specializing in open-source tools for reproducible bioinformatics
🎯 Mission: Building accessible workflows and packages for clinical and research bioinformatics

Resources & Links:

Featured Projects

🌟 UCSCXenaShiny — Interactive Shiny app for exploring UCSC Xena datasets
🔧 UCSCXenaTools — R toolkit to access and manipulate UCSC Xena data
⚗️ bregr — Selected research software from WangLab @ CSU
📰 weekly — Openbiox Weekly: curated bioinformatics news and resources
🎓 Tech-Workshop — OncoHarmony Network workshops and teaching materials

Connect with Me

💬 Discussion & Support: GitHub Discussions | Email

bilibili wechat zhihu twitter scholar

GitHub Stats

🐱 My GitHub Data

📦 5.0 MB Used in GitHub's Storage

🏆 5,440 Contributions in the Year 2026

🚫 Not Opted to Hire

📜 100 Public Repositories

🔑 31 Private Repositories

I'm an Early 🐤

🌞 Morning                5331 commits        ████░░░░░░░░░░░░░░░░░░░░░   17.11 % 
🌆 Daytime                11311 commits       █████████░░░░░░░░░░░░░░░░   36.31 % 
🌃 Evening                10320 commits       ████████░░░░░░░░░░░░░░░░░   33.13 % 
🌙 Night                  4189 commits        ███░░░░░░░░░░░░░░░░░░░░░░   13.45 %

📅 I'm Most Productive on Friday

Monday                   4606 commits        ████░░░░░░░░░░░░░░░░░░░░░   14.79 % 
Tuesday                  4694 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.07 % 
Wednesday                4803 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.42 % 
Thursday                 4815 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.46 % 
Friday                   5025 commits        ████░░░░░░░░░░░░░░░░░░░░░   16.13 % 
Saturday                 3539 commits        ███░░░░░░░░░░░░░░░░░░░░░░   11.36 % 
Sunday                   3669 commits        ███░░░░░░░░░░░░░░░░░░░░░░   11.78 %

🤖 AI Coding This Week

No AI Coding Activity Tracked This Week

I Mostly Code in R

R                        99 repos            ███████████░░░░░░░░░░░░░░   45.83 % 
Python                   30 repos            ███░░░░░░░░░░░░░░░░░░░░░░   13.89 % 
HTML                     25 repos            ███░░░░░░░░░░░░░░░░░░░░░░   11.57 % 
Rust                     11 repos            █░░░░░░░░░░░░░░░░░░░░░░░░   05.09 % 
SCSS                     3 repos             ░░░░░░░░░░░░░░░░░░░░░░░░░   01.39 %

Last Updated on 30/09/2026 23:03:46 UTC

These Readme stats are generated using github action awesome-readme-stats

NOTE: Top languages does not indicate my skill level or anything like that. It is just a metric of which languages have been hosted by me on GitHub based on the usage across repositories.

Pinned Loading

  1. sigminer sigminer Public

    🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html

    R 163 20

  2. openbiox/weekly openbiox/weekly Public

    生信爱好者周刊（每周日发布）

    HTML 460 30

  3. ropensci/UCSCXenaTools ropensci/UCSCXenaTools Public

    📦 An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/

    R 117 13

  4. openbiox/UCSCXenaShiny openbiox/UCSCXenaShiny Public

    📊 An R package for interactively exploring UCSC Xena https://xenabrowser.net/datapages/; Book: https://lishensuo.github.io/UCSCXenaShiny_Book; App online: https://shiny.zhoulab.ac.cn/UCSCXenaShiny,…

    R 103 33

  5. openbiox/Cookbook-for-R-Chinese openbiox/Cookbook-for-R-Chinese Public

    📚Cookbook for R 中文翻译

    TeX 142 68

  6. pybook pybook Public

    《交互的Python：数据分析入门》

    134 15