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Gray Lab

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  1. DL4Proteins-notebooks DL4Proteins-notebooks Public

    Colab Notebooks covering deep learning tools for biomolecular structure prediction and design

    Jupyter Notebook 723 128

  2. IgFold IgFold Public

    Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies

    Python 429 72

  3. IgLM IgLM Public

    Generative Language Modeling for Antibody Design

    Python 196 32

  4. FLAb FLAb Public

    Fitness landscapes for antibodies

    Python 196 30

  5. GeoDock GeoDock Public

    Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.

    Python 102 17

  6. AlphaRED AlphaRED Public

    AlphaFold-initiated replica exchange protein docking

    Python 94 19

Repositories

Showing 10 of 21 repositories
  • IgFold Public

    Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies

    Graylab/IgFold's past year of commit activity
    Python 429 72 4 0 Updated Sep 9, 2026
  • ProtAff Public

    Protein Binding Affinity Prediction via LoRA-Finetuned ESM-2

    Graylab/ProtAff's past year of commit activity
    Python 0 0 0 0 Updated Sep 1, 2026
  • FLAb Public

    Fitness landscapes for antibodies

    Graylab/FLAb's past year of commit activity
    Python 196 30 4 1 Updated Aug 17, 2026
  • IgLM Public

    Generative Language Modeling for Antibody Design

    Graylab/IgLM's past year of commit activity
    Python 196 32 6 0 Updated Jul 20, 2026
  • DiffEnergy Public
    Graylab/DiffEnergy's past year of commit activity
    Python 4 MIT 1 0 0 Updated Jun 29, 2026
  • GermRL Public
    Graylab/GermRL's past year of commit activity
    Python 1 MIT 0 0 0 Updated Jun 9, 2026
  • picap Public

    CAPSIF2 and PiCAP

    Graylab/picap's past year of commit activity
    Jupyter Notebook 13 MIT 2 0 0 Updated May 29, 2026
  • DL4Proteins-notebooks Public

    Colab Notebooks covering deep learning tools for biomolecular structure prediction and design

    Graylab/DL4Proteins-notebooks's past year of commit activity
    Jupyter Notebook 723 MIT 128 9 4 Updated Apr 17, 2026
  • AF2Dock Public
    Graylab/AF2Dock's past year of commit activity
    Python 15 MIT 2 0 0 Updated Mar 5, 2026
  • dockqc Public

    Benchmark of protein-carbohydrate interactions

    Graylab/dockqc's past year of commit activity
    Python 1 2 0 0 Updated Sep 9, 2025

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