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@AnacletoLAB

AnacletoLab

Computational Biology and Bioinformatics Lab - Dept. of Computer Science - UNIMI

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  1. grape grape Public

    🍇 GRAPE is a Rust/Python Graph Representation Learning library for Predictions and Evaluations

    Jupyter Notebook 638 39

  2. ensmallen ensmallen Public

    🍇 Ensmallen is the Rust/Python high-performance graph processing submodule of the GRAPE library.

    Python 41 14

  3. RNA-KG RNA-KG Public

    Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering, and link prediction.

    Jupyter Notebook 29 2

  4. sHAM sHAM Public

    Compact representations of convolutional neural networks via weight pruning and quantization

    Python 10 3

  5. parSMURF parSMURF Public

    High Performance Computing imbalance-aware machine learning tool for the genome-wide detection of pathogenic variants

    Python 7 2

  6. epigenomic_dataset epigenomic_dataset Public

    Python package wrapping ENCODE epigenomic data for a number of reference cell lines.

    Jupyter Notebook 6 1

Repositories

Showing 10 of 35 repositories
  • schemalink-webapp Public

    Source code for the webapp of the Schemalink project

    AnacletoLAB/schemalink-webapp's past year of commit activity
    TypeScript 1 AGPL-3.0 1 15 0 Updated Sep 20, 2026
  • cupid-webapp Public

    Sito web per la predizione di interazioni tra RNA non codificanti

    AnacletoLAB/cupid-webapp's past year of commit activity
    Python 0 1 0 0 Updated Sep 16, 2026
  • schemalink-api Public

    Source code for the API of the Schemalink project

    AnacletoLAB/schemalink-api's past year of commit activity
    Python 2 AGPL-3.0 1 0 0 Updated Sep 16, 2026
  • mosclust Public

    Stability based methods for model order selection in clustering problems.

    AnacletoLAB/mosclust's past year of commit activity
    R 0 0 0 0 Updated Sep 10, 2026
  • clusterv Public

    The clusterv R package implements a set of functions to assess the reliability of clusters discovered by clustering algorithms.

    AnacletoLAB/clusterv's past year of commit activity
    R 0 0 0 0 Updated Sep 9, 2026
  • schemalink-docs Public

    Source code for the documentation website of the Schemalink project

    AnacletoLAB/schemalink-docs's past year of commit activity
    Ruby 0 CC0-1.0 0 0 0 Updated Sep 9, 2026
  • GRIP-Transformer Public

    Generative Non-coding RNA Interaction Predictor (GRIP). Seq2seq transformer model with encoder, decoder modules for generative RNA-RNA interaction modelling

    AnacletoLAB/GRIP-Transformer's past year of commit activity
    Python 0 0 0 0 Updated Sep 5, 2026
  • RNA-KG Public

    Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering, and link prediction.

    AnacletoLAB/RNA-KG's past year of commit activity
    Jupyter Notebook 29 Apache-2.0 2 1 0 Updated Aug 7, 2026
  • rnacentral-etl Public

    Lightweight parser for RNAcentral releases that extracts URS identifiers, metadata, and sequences. Supports downstream integration with and annotation datasets.

    AnacletoLAB/rnacentral-etl's past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Mar 6, 2026
  • tide-var Public

    Ensemble of deep neural networks for the prediction of pathogenic variants in Mendelian diseases

    AnacletoLAB/tide-var's past year of commit activity
    Python 0 1 0 0 Updated Jan 21, 2026

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