Issues

• Micom couldn't pick up column names when building community model

  micom-dev/micom#227 · Filter by author suetli19 opened on Nov 11, 2025
  9

• Predicting abundance but requiring abundance

  micom-dev/micom#223 · Filter by author freiburgermsu opened on Oct 5, 2025
  5

• ValueError: No ID from the medium could be found in the exchange reactions.

  micom-dev/micom#221 · Filter by author xiangyupan opened on Sep 17, 2025
  1

• Issues applying anaerobic media: '' is not a valid SBML 'SId' and compartment misidentification

  micom-dev/micom#216 · Filter by author vicru93 opened on Jul 1, 2025
  1

• saving intermediate output from "grow"

  micom-dev/micom#181 · Filter by author zoey-rw opened on May 27, 2024
  1

• Possible Bug in com.knockout_taxa()

  micom-dev/micom#172 · Filter by author alejandrocs98 opened on Apr 11, 2024
  4

• Analyse sample growth on multiple media (multi threading)

  micom-dev/micom#164 · Filter by author PathogeNish opened on Mar 4, 2024
  3

• Error while copying model using model.copy()

  micom-dev/micom#72 · Filter by author cdiener opened on Mar 16, 2022
  2

• Update and fix the docs

  micom-dev/micom#43 · Filter by author cdiener opened on Jun 17, 2021
  

• Support for GTDB taxonomy?

  micom-dev/micom#36 · Filter by author nick-youngblut opened on May 13, 2021
  8

• [MICOM 1.0 API] Proposed new format for fluxes

  feature
  micom-dev/micom#34 · Filter by author cdiener opened on Apr 26, 2021
  2

• Implement more checks and help for model tables

  micom-dev/micom#26 · Filter by author cdiener opened on Mar 24, 2021

• Should warn about mismatched IDs

  micom-dev/micom#7 · Filter by author cdiener opened on Jul 25, 2019