From 46307f2d206bf1ffc728df3ad87daca640e107bd Mon Sep 17 00:00:00 2001
From: ***** <721466+soodoku@users.noreply.github.com>
Date: Sun, 20 Sep 2026 17:02:24 -0700
Subject: [PATCH 1/2] Repair dependency CI and separate research tests from
 wheel tests

---
 .github/workflows/ci.yml                             |  9 ++++++---
 .../tests}/test_estimated_validation.py              |  0
 pyproject.toml                                       | 12 +++++++++---
 3 files changed, 15 insertions(+), 6 deletions(-)
 rename {tests => experiments/tests}/test_estimated_validation.py (100%)

diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
index 3b0230e..7139375 100644
--- a/.github/workflows/ci.yml
+++ b/.github/workflows/ci.yml
@@ -4,6 +4,7 @@ on:
   push:
     branches: [main]
   pull_request:
+  workflow_dispatch:
   schedule:
     - cron: "17 6 * * 1"
 
@@ -16,7 +17,7 @@ concurrency:
 
 jobs:
   package:
-    uses: gojiplus/py-canon/.github/workflows/reusable-ci.yml@07c6621880b82afd28ab7230eab6e79f96d080e3 # v1
+    uses: gojiplus/py-canon/.github/workflows/reusable-ci.yml@6381ef50660166e3836a2e687f81b5f9b5640b2e # v1
     with:
       wheel-import: queue_shift
 
@@ -25,7 +26,7 @@ jobs:
     timeout-minutes: 30
     steps:
       - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
+      - uses: astral-sh/setup-uv@bec219d24cd3e171d82865faccec33120bb574f4 # v10.1.0
       - name: Sync environment
         run: uv sync --frozen --all-groups --all-extras
       - name: Install TeX
@@ -33,4 +34,6 @@ jobs:
           sudo apt-get update
           sudo apt-get install --yes texlive-latex-extra texlive-bibtex-extra
       - name: Check research artifacts
-        run: make research-check
+        run: |
+          uv run pytest experiments/tests
+          make research-check
diff --git a/tests/test_estimated_validation.py b/experiments/tests/test_estimated_validation.py
similarity index 100%
rename from tests/test_estimated_validation.py
rename to experiments/tests/test_estimated_validation.py
diff --git a/pyproject.toml b/pyproject.toml
index 3d06aa0..b58e698 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -38,7 +38,7 @@ Issues = "https://github.com/finite-sample/queue-shift/issues"
 Repository = "https://github.com/finite-sample/queue-shift"
 
 [build-system]
-requires = ["uv_build>=0.12.3,<0.13"]
+requires = ["uv_build>=0.12.5,<0.13"]
 build-backend = "uv_build"
 
 [tool.uv.build-backend]
@@ -79,6 +79,7 @@ convention = "google"
 [tool.ruff.lint.per-file-ignores]
 "tests/**" = ["S101", "D", "ARG", "SLF"]
 "experiments/**" = ["T201"]
+"experiments/tests/**" = ["S101", "D", "ARG", "SLF"]
 "experiments/analyze_*.py" = ["E501"]
 
 [tool.pyright]
@@ -86,16 +87,21 @@ include = ["src"]
 typeCheckingMode = "standard"
 
 [tool.pydoclint]
+exclude = '\.venv|tests|docs|experiments'
 style = "google"
 arg-type-hints-in-docstring = false
 check-return-types = false
 check-class-attributes = false
 allow-init-docstring = true
-exclude = '\\.venv|tests|experiments'
 
 [tool.pytest.ini_options]
+minversion = "8"
+log_level = "INFO"
+xfail_strict = true
+addopts = "-ra --strict-config --strict-markers"
+filterwarnings = ["error"]
 pythonpath = ["."]
-testpaths = ["tests"]
+testpaths = ["tests", "experiments/tests"]
 
 [tool.coverage.run]
 source = ["src"]

From e0b0b755e4f9016b4da08a7228102c7a0229fdf5 Mon Sep 17 00:00:00 2001
From: ***** <721466+soodoku@users.noreply.github.com>
Date: Sun, 20 Sep 2026 17:09:28 -0700
Subject: [PATCH 2/2] Declare custom research workflow ownership

---
 pyproject.toml | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/pyproject.toml b/pyproject.toml
index b58e698..8f19846 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -105,3 +105,7 @@ testpaths = ["tests", "experiments/tests"]
 
 [tool.coverage.run]
 source = ["src"]
+
+[tool.preen]
+# Custom research workflows are maintained here rather than generated by Copier.
+skip_checks = ["template"]