Issues

• Error in validObject(.Object) when reading 'representations.vcf' file

  PapenfussLab/StructuralVariantAnnotation#47 · Filter by author sanghoonleeeins opened on May 1, 2025

• Unclear CT field

  PapenfussLab/StructuralVariantAnnotation#46 · Filter by author SergioManzano10 opened on Mar 12, 2025

• ERROR in converting gGrange to vcf

  PapenfussLab/StructuralVariantAnnotation#45 · Filter by author 9421g opened on Nov 15, 2024

• Preserving Info Fields with breakpointgr2bedpe()

  PapenfussLab/StructuralVariantAnnotation#41 · Filter by author blex-max opened on Feb 8, 2023
  2

• Use SVLEN not END

  PapenfussLab/StructuralVariantAnnotation#38 · Filter by author d-cameron opened on Dec 8, 2021

• Use ALT field instead of SVTYPE for determining symbolic allele type

  PapenfussLab/StructuralVariantAnnotation#37 · Filter by author d-cameron opened on Dec 6, 2021

• Add support for LongRanger UNK and IMPRECISE_DIR

  PapenfussLab/StructuralVariantAnnotation#36 · Filter by author d-cameron opened on Dec 6, 2021

• Interpretation error for breakend records with SVTYPE!=BND

  bug
  PapenfussLab/StructuralVariantAnnotation#35 · Filter by author d-cameron opened on Apr 28, 2021

• How to use single breakend to increase detection sensitivity for insertions

  help wanted
  PapenfussLab/StructuralVariantAnnotation#33 · Filter by author tgong1 opened on Feb 11, 2021
  2

• Merging SVs

  enhancement
  PapenfussLab/StructuralVariantAnnotation#29 · Filter by author gdeoli opened on May 20, 2020
  1

• Error loading vcf with some SV types

  PapenfussLab/StructuralVariantAnnotation#26 · Filter by author cboursnell opened on Nov 21, 2019
  1

• <CNV> not supported

  enhancement
  PapenfussLab/StructuralVariantAnnotation#25 · Filter by author d-cameron opened on Nov 8, 2019