Issues

• Question about the input of the kinaseSubstrateScore function

  PYangLab/PhosR#19 · Filter by author iamagerm opened on Sep 4, 2025

• The predicted kinase to substrates by PhosR

  PYangLab/PhosR#18 · Filter by author xiaocong3333 opened on May 28, 2024

• I have a question for Step 4: Identifying stably phosphorylated sites and Step 5: Normalization and batch correction of data sets

  PYangLab/PhosR#17 · Filter by author xiaocong3333 opened on May 13, 2024

• normalization of phosphosites to protein levels

  PYangLab/PhosR#16 · Filter by author dorvashmr opened on Feb 14, 2024
  1

• Signalome function throws error

  PYangLab/PhosR#15 · Filter by author adhutz opened on May 5, 2023

• Imputation function not working

  PYangLab/PhosR#14 · Filter by author Januka-K opened on Feb 15, 2023
  1

• Mistake in kinaseSubstrateScore?

  PYangLab/PhosR#13 · Filter by author DijkJel opened on Dec 1, 2022

• Kinase annotations question

  PYangLab/PhosR#12 · Filter by author ravitharakan opened on Sep 12, 2022

• Question on multi phosphorylated peptides

  PYangLab/PhosR#11 · Filter by author laurenctang opened on Aug 30, 2022

• error with kinaseSubstrateScore()

  PYangLab/PhosR#10 · Filter by author canbruce1234 opened on Aug 26, 2022

• shuffled module names in signalomes() and plotSignalomeMap() output figures

  PYangLab/PhosR#7 · Filter by author IwanParf opened on Apr 23, 2022
  4