Issues

• Tumor vs. Normal Tissue Model Not Working

  CompEpigen/methylbert#30 · Filter by author Danielsm8 opened on Oct 2, 2026
  1

• nanopore support

  CompEpigen/methylbert#29 · Filter by author lemoncarrot opened on Jul 10, 2026
  1

• Random MLM replacement can sample special tokens

  CompEpigen/methylbert#28 · Filter by author sbauer0 opened on May 18, 2026
  1

• Rerunning fine tuning with normal cell type atlas samples

  CompEpigen/methylbert#27 · Filter by author alvinwt opened on Dec 16, 2025
  1

• Parameter name inconsistency: masked_lm_labels vs labels in forward method

  CompEpigen/methylbert#26 · Filter by author sw1125598670 opened on Nov 26, 2025

• pysam: HTSLIB_CONFIGURE_OPTIONS=None

  CompEpigen/methylbert#25 · Filter by author kite-f opened on Oct 24, 2025

• MethylBERT Usage on Plasma cfDNA

  CompEpigen/methylbert#24 · Filter by author LiJingqi7 opened on Jun 16, 2025

• Specification about DMR.csv

  CompEpigen/methylbert#20 · Filter by author Yijun-Tian opened on Apr 23, 2025
  3

• mm 10 pre-trained model cannot be restored properly

  CompEpigen/methylbert#13 · Filter by author hanyangii opened on Oct 29, 2024
  

• Loading python 3.7 version model with python 3.9 version

  CompEpigen/methylbert#9 · Filter by author hanyangii opened on Sep 30, 2024